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Complete list of Microarray experiments implemented in PathoPlant:
Stimulus  Class  Array type  No. of records  No. of genes  Expression set 
Al-oversupplied roots  Abiotic stress  AFGC  18694 6876 1005823537
Cold-stressed roots 0.5hr  Abiotic stress  Affy ATH1  29762 15173 138
Cold-stressed roots 12hr  Abiotic stress  Affy ATH1  28776 14740 138
Cold-stressed roots 1hr  Abiotic stress  Affy ATH1  29773 15128 138
Cold-stressed roots 24hr  Abiotic stress  Affy ATH1  27840 14349 138
Cold-stressed roots 3hr  Abiotic stress  Affy ATH1  29700 15260 138
Cold-stressed roots 6hr  Abiotic stress  Affy ATH1  29600 15134 138
Cold-stressed shoots 0.5hr  Abiotic stress  Affy ATH1  25836 13276 138
Cold-stressed shoots 12hr  Abiotic stress  Affy ATH1  24772 12736 138
Cold-stressed shoots 1hr  Abiotic stress  Affy ATH1  25178 13145 138
Cold-stressed shoots 24hr  Abiotic stress  Affy ATH1  24251 12546 138
Cold-stressed shoots 3hr  Abiotic stress  Affy ATH1  26484 13606 138
Cold-stressed shoots 6hr  Abiotic stress  Affy ATH1  25437 13099 138
Drought-stressed roots 0.25hr  Abiotic stress  Affy ATH1  30168 15343 141
Drought-stressed roots 0.5hr  Abiotic stress  Affy ATH1  29907 15239 141
Drought-stressed roots 12hr  Abiotic stress  Affy ATH1  30285 15375 141
Drought-stressed roots 1hr  Abiotic stress  Affy ATH1  29849 15194 141
Drought-stressed roots 24hr  Abiotic stress  Affy ATH1  30285 15397 141
Drought-stressed roots 3hr  Abiotic stress  Affy ATH1  30078 15275 141
Drought-stressed roots 6hr  Abiotic stress  Affy ATH1  29790 15202 141
Drought-stressed shoots 0.25hr  Abiotic stress  Affy ATH1  25830 13293 141
Drought-stressed shoots 0.5hr  Abiotic stress  Affy ATH1  26063 13406 141
Drought-stressed shoots 12hr  Abiotic stress  Affy ATH1  27145 13861 141
Drought-stressed shoots 1hr  Abiotic stress  Affy ATH1  26475 13653 141
Drought-stressed shoots 24hr  Abiotic stress  Affy ATH1  25706 13171 141
Drought-stressed shoots 3hr  Abiotic stress  Affy ATH1  26920 13793 141
Drought-stressed shoots 6hr  Abiotic stress  Affy ATH1  26003 13352 141
Osmotic-stressed roots 0.5hr  Abiotic stress  Affy ATH1  29556 15094 139
Osmotic-stressed roots 12hr  Abiotic stress  Affy ATH1  28450 14608 139
Osmotic-stressed roots 1hr  Abiotic stress  Affy ATH1  29382 14991 139
Osmotic-stressed roots 24hr  Abiotic stress  Affy ATH1  29074 14989 139
Osmotic-stressed roots 3hr  Abiotic stress  Affy ATH1  29411 15041 139
Osmotic-stressed roots 6hr  Abiotic stress  Affy ATH1  28818 14881 139
Osmotic-stressed shoots 0.5hr  Abiotic stress  Affy ATH1  25652 13225 139
Osmotic-stressed shoots 12hr  Abiotic stress  Affy ATH1  25675 13178 139
Osmotic-stressed shoots 1hr  Abiotic stress  Affy ATH1  26375 13578 139
Osmotic-stressed shoots 24hr  Abiotic stress  Affy ATH1  24698 12764 139
Osmotic-stressed shoots 3hr  Abiotic stress  Affy ATH1  26133 13498 139
Osmotic-stressed shoots 6hr  Abiotic stress  Affy ATH1  25181 12998 139
Pb-oversupplied (25ppm) leaves  Abiotic stress  Affy 8K  4164 3868 19
Pb-oversupplied (25ppm) roots  Abiotic stress  Affy 8K  4671 4354 19
Pb-oversupplied (50ppm) leaves  Abiotic stress  Affy 8K  4395 4089 19
Pb-oversupplied (50ppm) roots  Abiotic stress  Affy 8K  4602 4289 19
Salt-stressed roots 0.5hr  Abiotic stress  Affy ATH1  29865 15199 140
Salt-stressed roots 12hr  Abiotic stress  Affy ATH1  28764 15017 140
Salt-stressed roots 1hr  Abiotic stress  Affy ATH1  29419 14998 140
Salt-stressed roots 24hr  Abiotic stress  Affy ATH1  29597 15160 140
Salt-stressed roots 3hr  Abiotic stress  Affy ATH1  29551 15069 140
Salt-stressed roots 6hr  Abiotic stress  Affy ATH1  28312 14582 140
Salt-stressed shoots 0.5hr  Abiotic stress  Affy ATH1  25884 13248 140
Salt-stressed shoots 12hr  Abiotic stress  Affy ATH1  26601 13666 140
Salt-stressed shoots 1hr  Abiotic stress  Affy ATH1  25611 13143 140
Salt-stressed shoots 24hr  Abiotic stress  Affy ATH1  25779 13229 140
Salt-stressed shoots 3hr  Abiotic stress  Affy ATH1  25875 13348 140
Salt-stressed shoots 6hr  Abiotic stress  Affy ATH1  25812 13294 140
P. syringae pv. maculicola 16hpi  Bacterial pathogen  Affy ATH1  23775 12420 1008031517
P. syringae pv. maculicola 24hpi  Bacterial pathogen  Affy ATH1  23941 12399 1008031517
P. syringae pv. maculicola 48hpi  Bacterial pathogen  Affy ATH1  24032 12621 1008031517
P. syringae pv. maculicola 4hpi  Bacterial pathogen  Affy ATH1  23633 12441 1008031517
P. syringae pv. maculicola 8hpi  Bacterial pathogen  Affy ATH1  23944 12520 1008031517
P. syringae pv. maculicola avrRpt2- 16hpi  Bacterial pathogen  Affy ATH1  24118 12626 1008031517
P. syringae pv. maculicola avrRpt2- 24hpi  Bacterial pathogen  Affy ATH1  23993 12448 1008031517
P. syringae pv. maculicola avrRpt2- 48hpi  Bacterial pathogen  Affy ATH1  24150 12594 1008031517
P. syringae pv. maculicola avrRpt2- 4hpi  Bacterial pathogen  Affy ATH1  23792 12508 1008031517
P. syringae pv. maculicola avrRpt2- 8hpi  Bacterial pathogen  Affy ATH1  23765 12475 1008031517
P. syringae pv. phaseolicola 24hpi  Bacterial pathogen  Affy ATH1  34229 12110 1007966202
P. syringae pv. phaseolicola 2hpi  Bacterial pathogen  Affy ATH1  34316 12195 1007966202
P. syringae pv. phaseolicola 6hpi  Bacterial pathogen  Affy ATH1  36490 12755 1007966202
P. syringae pv. tomato 24hpi  Bacterial pathogen  Affy ATH1  31576 11395 1007966202
P. syringae pv. tomato 2hpi  Bacterial pathogen  Affy ATH1  34509 12190 1007966202
P. syringae pv. tomato 6hpi  Bacterial pathogen  Affy ATH1  37091 13027 1007966202
P. syringae pv. tomato avrRpm1 24hpi  Bacterial pathogen  Affy ATH1  33703 11998 1007966202
P. syringae pv. tomato avrRpm1 2hpi  Bacterial pathogen  Affy ATH1  34654 12259 1007966202
P. syringae pv. tomato avrRpm1 6hpi  Bacterial pathogen  Affy ATH1  36123 12788 1007966202
P. syringae pv. tomato hrcC- 24hpi  Bacterial pathogen  Affy ATH1  34385 12130 1007966202
P. syringae pv. tomato hrcC- 2hpi  Bacterial pathogen  Affy ATH1  34480 12097 1007966202
P. syringae pv. tomato hrcC- 6hpi  Bacterial pathogen  Affy ATH1  37006 12866 1007966202
X. campestris  Bacterial pathogen  AFGC  17902 6868 1005823536
Inflorescence vs. shoot apex, vegetative  Development  Affy ATH1  40425 13975 153
Inflorescence vs. young leaves  Development  Affy ATH1  39825 13827 153
Chitin 10min  Elicitor  Carnegie  3949 1590 1005823605
Chitin 1hr  Elicitor  Carnegie  3847 1568 1005823605
Chitin 24hr  Elicitor  Carnegie  3665 1527 1005823605
Chitin 30min  Elicitor  Carnegie  3915 1583 1005823605
Chitin 3hr  Elicitor  Carnegie  3886 1574 1005823605
Chitin 6hr  Elicitor  Carnegie  3895 1591 1005823605
Chitooctaose  Elicitor  Affy ATH1  41660 14490 GSE8319
EF-Tu 30min  Elicitor  Affy ATH1  28772 14672 E-MEXP-547
EF-Tu 60min  Elicitor  Affy ATH1  28342 14493 E-MEXP-547
Flg22 (P. syringae) 1hr  Elicitor  Affy ATH1  31713 11527 1008080727
Flg22 (P. syringae) 4hr  Elicitor  Affy ATH1  35591 12750 1008080727
Harpin Z 1hr  Elicitor  Affy ATH1  31969 11516 1008080727
Harpin Z 4hr  Elicitor  Affy ATH1  36616 12898 1008080727
Lipopolysaccharide 1hr  Elicitor  Affy ATH1  33653 11951 1008080727
Lipopolysaccharide 4hr  Elicitor  Affy ATH1  36730 12911 1008080727
NPP1 (P. parasitica) 1hr  Elicitor  Affy ATH1  31914 11566 1008080727
NPP1 (P. parasitica) 4hr  Elicitor  Affy ATH1  36829 13022 1008080727
B. cinerea 18hpi  Fungal pathogen  Affy ATH1  36284 12971 1007967417
B. cinerea 48hpi  Fungal pathogen  Affy ATH1  34706 12820 1007967417
E. orontii 12hpi  Fungal pathogen  Affy ATH1  37880 13601 1008031468
E. orontii 18hpi  Fungal pathogen  Affy ATH1  37621 13541 1008031468
E. orontii 24hpi  Fungal pathogen  Affy ATH1  37520 13436 1008031468
E. orontii 2dpi  Fungal pathogen  Affy ATH1  38030 13605 1008031468
E. orontii 3dpi  Fungal pathogen  Affy ATH1  37799 13545 1008031468
E. orontii 4dpi  Fungal pathogen  Affy ATH1  38946 14154 1008031468
E. orontii 5dpi  Fungal pathogen  Affy ATH1  38361 13896 1008031468
E. orontii 6hpi  Fungal pathogen  Affy ATH1  37917 13779 1008031468
F. virguliforme  Fungal pathogen  AFGC  19014 8629 1005823583
Powdery mildew  Fungal pathogen  AFGC  10155 6992 1005823549
P. infestans 12hpi  Oomycete pathogen  Affy ATH1  36020 12600 1007966021
P. infestans 16hpi  Oomycete pathogen  AFGC  18695 6738 1005823534
P. infestans 24hpi  Oomycete pathogen  Affy ATH1  35914 12613 1007966021
P. infestans 6hpi  Oomycete pathogen  Affy ATH1  31745 11727 1007966021
ABA 1hr (10然)  Plant hormone  Affy ATH1  25526 13400 1007964750
ABA 24hr (3然)  Plant hormone  Affy ATH1  26108 13393 1007967394
ABA 24hr (30然)  Plant hormone  Affy ATH1  26613 13645 1007967394
ABA 30min (10然)  Plant hormone  Affy ATH1  25664 13404 1007964750
ABA 3hr (10然)  Plant hormone  Affy ATH1  24821 13258 1007964750
Brassinolide 1hr (1然)  Plant hormone  Affy ATH1  25276 13321 1007966053
Brassinolide 30min (1然)  Plant hormone  Affy ATH1  24691 12917 1007966053
Brassinolide 3hr (1然)  Plant hormone  Affy ATH1  24793 13073 1007966053
Brassinolide 3hr (10nm)  Plant hormone  Affy ATH1  28062 14583 1007999438
GA3 1hr  Plant hormone  Affy ATH1  26314 13821 1007966175
GA3 30min  Plant hormone  Affy ATH1  26120 13601 1007966175
GA3 3hr  Plant hormone  Affy ATH1  25519 13726 1007966175
IAA 1hr  Plant hormone  Affy ATH1  25334 13375 1007965859
IAA 30min  Plant hormone  Affy ATH1  26511 13830 1007965859
IAA 3hr  Plant hormone  Affy ATH1  24943 13381 1007965859
Zeatin 1hr (1然)  Plant hormone  Affy ATH1  25954 13628 1007966040
Zeatin 30min (1然)  Plant hormone  Affy ATH1  26371 13745 1007966040
Zeatin 3hr (1然)  Plant hormone  Affy ATH1  25203 13555 1007966040
Zeatin 3hr (20然)  Plant hormone  Affy ATH1  40997 14227 1008031453
Cis-jasmone  Signal molecule  AFGC  19964 8044 1005823574
Ethylene 24hr  Signal molecule  Carnegie  9211 1425 1005823581
Ethylene 2hr  Signal molecule  Carnegie  7707 1490 1005823581
Hydrogen peroxide  Signal molecule  AFGC  19089 6898 1005823545
Methyl-jasmonate  Signal molecule  AFGC  20450 8178 1005823574
Methyl-jasmonate 1hr  Signal molecule  Affy ATH1  25308 13308 1007965964
Methyl-jasmonate 30min  Signal molecule  Affy ATH1  25549 13329 1007965964
Methyl-jasmonate 3hr  Signal molecule  Affy ATH1  24150 12765 1007965964
SA analog BTH  Signal molecule  AFGC  9955 6854 1005823548
Salicylic acid  Signal molecule  Affy ATH1  26250 13960 1008080827
TMV infected leaves 3dpi  Viral pathogen  AFGC  17973 6449 1005823504
TMV infected leaves 4dpi  Viral pathogen  AFGC  28451 7854 1005823602
TMV systemic leaves 14dpi  Viral pathogen  AFGC  74518 9313 1005823505
TMV systemic leaves 14dpi  Viral pathogen  AFGC  74518 9313 1005823602

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